Figuring things out… Sujai Kumar

Complex Systems Publications and Presentations

Genomics and transcriptomics across the diversity of the Nematoda

by: Mark Blaxter, Sujai Kumar, Gaganjot Kaur, Georgios Koutsouvoulos, Ben Elsworth

Parasite Immunol. 2011 Nov 2. doi: 10.1111/j.1365-3024.2011.01342.x.
PMID: 22044053

Experimental evolution, genetic analysis and genome re-sequencing reveal the mutation conferring artemisinin resistance in an isogenic lineage of malaria parasites

by: Paul Hunt, Axel Martinelli, Katarzyna Modrzynska, Sofia Borges, Alison Creasey, Louise Rodrigues, Dario Beraldi, Laurence Loewe, Richard Fawcett, Sujai Kumar, Marian Thomson, Urmi Trivedi, Thomas Otto, Arnab Pain, Mark Blaxter, Pedro Cravo

BMC Genomics, Vol. 11, No. 1. (2010), 499. doi:10.1186/1471-2164-11-499 Key: citeulike:8014259

http://dx.doi.org/10.1186/1471-2164-11-499
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Comparing de novo assemblers for 454 transcriptome data

by: Sujai Kumar, Mark Blaxter

BMC Genomics, Vol. 11, No. 1. (2010), 571. doi:10.1186/1471-2164-11-571 Key: citeulike:8031121

http://dx.doi.org/10.1186/1471-2164-11-571
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Characterization of a hotspot for mimicry: assembly of a butterfly wing transcriptome to genomic sequence at the HmYb/Sb locus

by: Laura Ferguson, Siu F. Lee, Nicola Chamberlain, Nicola Nadeau, Mathieu Joron, Simon Baxter, Paul Wilkinson, Alexie Papanicolaou, Sujai Kumar, thuan-Jin Kee, Richard Clark, Claire Davidson, Rebecca Glithero, Helen Beasley, Heiko Vogel, Richard Ffrench-Constant, Chris Jiggins

Molecular Ecology, Vol. 19, No. s1. (March 2010), pp. 240-254

http://dx.doi.org/10.1111/j.1365-294X.2009.04475.x
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Analysis of the genome sequences of three Drosophila melanogaster spontaneous mutation accumulation lines
Genome Research, Vol. 19, No. 7. (1 July 2009), pp. 1195-1201.
by Peter D. Keightley, Urmi Trivedi, Marian Thomson, Fiona Oliver, Sujai Kumar, Mark L. Blaxter

http://dx.doi.org/10.1101/gr.091231.109
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Thesis submitted for the MSc Informatics degree at the University of Edinburgh, 2007.

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Sujai Kumar, Sugata Mitra (2006). Self-organizing Traffic at a Malfunctioning Intersection. Journal of Artificial Societies and Social Simulations (JASSS) . PDF More…

Sugata Mitra, Sujai Kumar (2006, Volume 16, Issue 3). Fractal Replication in Time Manipulated One-Dimensional Cellular Automata. Complex Systems. [Download draft pdf]. More…

Kumar, S., (2005, April 15). Presented an invited talk on “The Game of Life: An introduction to Cellular Automata” to the Dept of Physics at the Birla Institute of Technology and Science, Pilani, India. More…

Kumar, S. (2004, April 22). Led discussion on ‘The Roots of Empathy: The Shared Manifold Hypothesis and the Neural Basis of Intersubjectivity‘ (Vittorio Gallese). Artificial Neural Networks and Computational Brain Theory Seminar at the University of Illinois at Urbana-Champaign. [www.anncbt.org]

Kumar, S. (2003, November 13). Led discussion on ‘The Spontaneous Self-Organization of an Adaptive Language‘ (Luc Steels). Artificial Neural Networks and Computational Brain Theory Seminar at the University of Illinois at Urbana-Champaign. [www.anncbt.org]